STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2R9T2Uncharacterized protein. (594 aa)    
Predicted Functional Partners:
A0A0D2R9J1
Uncharacterized protein.
  
   
 0.591
A0A0D2SU98
Uncharacterized protein.
  
   
 0.570
A0A0D2V1T1
Pectate lyase.
  
     0.540
A0A0D2VHD8
Uncharacterized protein.
  
     0.539
A0A0D2PCY9
Uncharacterized protein.
  
     0.537
A0A0D2PPA9
Uncharacterized protein.
  
     0.536
A0A0D2Q6L0
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
  0.536
A0A0D2Q6M3
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
  
 
  0.536
A0A0D2QFY2
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
 
  0.536
A0A0D2N3T6
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
 
  0.535
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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