Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2RC09Protein kinase domain-containing protein. (625 aa)    
Predicted Functional Partners:
A0A0D2MTM3
Uncharacterized protein.
    
 0.756
A0A0D2Q396
Uncharacterized protein.
    
 0.756
A0A0D2QUC0
F-box domain-containing protein.
    
 0.756
A0A0D2T0I2
F-box domain-containing protein.
    
 0.756
A0A0D2T584
Uncharacterized protein.
    
 0.756
A0A0D2MJC8
Uncharacterized protein.
    
 
 0.731
A0A0D2QD97
Uncharacterized protein.
    
 
 0.731
A0A0D2USY9
PRP38_assoc domain-containing protein.
    
 
 0.694
A0A0D2PXM7
RRM domain-containing protein.
   
 0.678
A0A0D2R2N4
RRM domain-containing protein.
   
 0.678
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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