STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2RH87Uncharacterized protein. (473 aa)    
Predicted Functional Partners:
A0A0D2Q134
Uncharacterized protein.
  
     0.442
A0A0D2REU0
Uncharacterized protein.
  
     0.434
A0A0D2RN26
Uncharacterized protein.
  
     0.431
A0A0D2S0N0
Uncharacterized protein.
  
     0.423
A0A0D2NQZ1
Uncharacterized protein.
   
   0.419
A0A0D2S3E2
Uncharacterized protein.
   
   0.419
A0A0D2SXW0
Uncharacterized protein.
   
   0.419
A0A0D2UZX0
Uncharacterized protein.
   
   0.419
A0A0D2SW93
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
  
     0.418
A0A0D2T8V9
F-box domain-containing protein.
  
     0.415
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.