Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2RH99Uncharacterized protein; Belongs to the protein kinase superfamily. (427 aa)    
Predicted Functional Partners:
A0A0D2RKP8
Uncharacterized protein.
   
  0.656
A0A0D2SE57
Uncharacterized protein.
   
  0.656
A0A0D2U5N8
Uncharacterized protein.
    
 0.647
A0A0D2QV96
RING-type domain-containing protein.
   
 0.599
A0A0D2T558
RING-type domain-containing protein.
   
 0.599
A0A0D2RCH1
Prenylcys_lyase domain-containing protein.
     
 0.572
A0A0D2RI42
BRO1 domain-containing protein.
    
 0.541
A0A0D2M5W5
Chloride channel protein.
     
 0.523
A0A0D2RNN1
Chloride channel protein.
     
 0.523
A0A0D2SBX3
PPM-type phosphatase domain-containing protein.
    
 0.490
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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