Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2RN47Uncharacterized protein. (832 aa)    
Predicted Functional Partners:
A0A0D2QHK4
WD_REPEATS_REGION domain-containing protein.
    
 0.759
A0A0D2QI27
Uncharacterized protein.
      
 0.696
A0A0D2TRL2
Tubulin-specific chaperone A; Belongs to the TBCA family.
      
 0.690
A0A0D2VM76
GUN4 domain-containing protein.
    
 
 0.686
A0A0D2QUU5
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.601
A0A0D2V1X2
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.542
A0A0D2QIV3
RING-type domain-containing protein.
     
 0.537
A0A0D2U499
RING-type domain-containing protein.
     
 0.537
A0A0D2W0B2
RING-type domain-containing protein.
     
 0.537
A0A0D2MU77
Uncharacterized protein; Belongs to the synaptobrevin family.
      
 0.533
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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