Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2S651Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (410 aa)    
Predicted Functional Partners:
A0A0D2TNU5
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 0.990
A0A0D2MWJ6
PPR_long domain-containing protein.
   
 0.988
GTF2H2
General transcription factor IIH subunit.
   
 0.987
A0A0D2TQJ3
Uncharacterized protein.
   
 0.987
A0A0D2TZW1
MAT1 domain-containing protein.
   
 0.980
A0A0D2Q7C8
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.976
A0A0D2RFY3
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.976
A0A0D2QPQ6
Uncharacterized protein.
    
 0.972
A0A0D2MPH8
Uncharacterized protein.
    
 0.963
A0A0D2S5L5
Uncharacterized protein.
    
 0.963
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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