Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2SDV2Protein kinase domain-containing protein. (490 aa)    
Predicted Functional Partners:
A0A0D2VYF0
BHLH domain-containing protein.
    
 
 0.657
A0A0D2PGX0
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
      
 0.656
A0A0D2TL25
Uncharacterized protein.
  
   
 0.622
A0A0D2QMZ5
Protein kinase domain-containing protein.
  
   
 0.576
A0A0D2SLN6
Protein kinase domain-containing protein.
  
   
 0.576
A0A0D2VGR1
Uncharacterized protein.
  
   
 0.564
A0A0D2UYR4
Uncharacterized protein.
      
 0.555
A0A0D2UDJ8
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
    
 
 0.521
A0A0D2QYD3
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
      
 0.518
A0A0D2T4G9
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
      
 0.518
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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