Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A0D2SHC1Protein kinase domain-containing protein. (429 aa)    
Predicted Functional Partners:
LIP1
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
 
 0.520
A0A0D2TRP1
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
      
 0.497
A0A0D2TIG6
Tub domain-containing protein; Belongs to the TUB family.
      
 0.452
A0A0D2PZD7
Uncharacterized protein.
    
 0.432
A0A0D2SA62
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
     
 0.431
A0A0D2MX06
Uncharacterized protein.
      
 0.429
A0A0D2T753
Uncharacterized protein.
      
 0.429
LIP1P
Lipoyl synthase, chloroplastic; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
 
 0.426
A0A0D2R0E5
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
  0.425
A0A0D2R4E9
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
  0.407
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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