STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2SHU4Ribosomal_S7 domain-containing protein. (90 aa)    
Predicted Functional Partners:
A0A0D2TTY5
Uncharacterized protein.
  
 0.986
A0A0D2NA85
Uncharacterized protein.
  
 0.977
A0A0D2VFI4
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.964
A0A0D2Q336
Uncharacterized protein.
  
 
 0.961
A0A0D2Q829
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.961
A0A0D2PMX5
Ribosomal_TL5_C domain-containing protein.
  
 
 0.953
A0A0D2UUS5
Uncharacterized protein.
  
 
 0.953
A0A0D2NI70
Uncharacterized protein.
   
 
 0.942
A0A0D2T318
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.941
A0A0D2VBN3
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.941
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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