Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2SLN6Protein kinase domain-containing protein. (620 aa)    
Predicted Functional Partners:
A0A0D2VGR1
Uncharacterized protein.
     
  0.817
A0A0D2TL25
Uncharacterized protein.
   
 
 0.686
A0A0D2PUC2
Uncharacterized protein.
    
 0.625
A0A0D2RZQ1
Uncharacterized protein.
    
 0.624
A0A0D2QJ53
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.591
A0A0D2VV81
Uncharacterized protein.
      
 0.587
A0A0D2SDV2
Protein kinase domain-containing protein.
  
   
 0.576
A0A0D2QZY4
Protein kinase domain-containing protein.
  
   
 0.558
A0A0D2PLR5
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.557
A0A0D2RX81
Uncharacterized protein.
   
 0.557
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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