STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2SU15Aminotran_5 domain-containing protein. (465 aa)    
Predicted Functional Partners:
A0A0D2SL37
Sulfurtransferase.
  
 0.973
A0A0D2SKT2
Uncharacterized protein.
   
 0.953
A0A0D2NE88
NifU_N domain-containing protein.
  
 0.938
A0A0D2PIU0
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.938
A0A0D2RJ90
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.938
A0A0D2S881
NifU_N domain-containing protein.
  
 0.938
A0A0D2T1F7
PALP domain-containing protein.
     
 0.937
A0A0D2T6E4
PALP domain-containing protein.
     
 0.937
A0A0D2SVY8
Uncharacterized protein.
  
 
 0.921
A0A0D2N4W7
Aspartate aminotransferase.
    
 0.907
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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