Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2T102Uncharacterized protein. (658 aa)    
Predicted Functional Partners:
A0A0D2TLU8
Uncharacterized protein.
      
 0.667
A0A0D2W973
Uncharacterized protein.
    
 0.598
A0A0D2TAN2
Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.
      
 0.521
A0A0D2QY37
Metaxin; Involved in transport of proteins into the mitochondrion. Belongs to the metaxin family.
    
 
 0.516
A0A0D2S5A1
LysM domain-containing protein.
      
 0.515
A0A0D2QB37
RING-type domain-containing protein.
      
 0.514
A0A0D2PQU7
Uncharacterized protein.
    
 0.439
A0A0D2QY31
Uncharacterized protein.
    
 0.439
A0A0D2SJ29
Uncharacterized protein.
    
 0.439
A0A0D2TGS4
Uncharacterized protein.
    
 0.439
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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