STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2T6S5HTH myb-type domain-containing protein. (95 aa)    
Predicted Functional Partners:
A0A0D2RR78
Uncharacterized protein.
  
     0.528
A0A0D2Q218
Uncharacterized protein.
  
     0.527
A0A0D2P7P7
Uncharacterized protein.
  
     0.526
A0A0D2R7X9
Uncharacterized protein.
  
     0.526
A0A0D2RAD8
Uncharacterized protein.
  
     0.526
A0A0D2SSQ0
Uncharacterized protein.
  
     0.526
A0A0D2T0Z3
Uncharacterized protein.
  
     0.526
A0A0D2TYP8
Uncharacterized protein.
  
     0.526
A0A0D2Q4P3
Uncharacterized protein.
  
     0.524
A0A0D2QWG6
Uncharacterized protein.
  
     0.524
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.