STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2T8J9Usp domain-containing protein. (229 aa)    
Predicted Functional Partners:
A0A0D2MNG5
Uncharacterized protein.
  
     0.512
A0A0D2SAG8
BHLH domain-containing protein.
  
     0.505
A0A0D2VF34
Cupin type-1 domain-containing protein.
  
     0.504
A0A0D2RJ28
MYND-type domain-containing protein.
  
     0.494
A0A0D2UZI3
Uncharacterized protein.
  
     0.491
A0A0D2VFV3
C2 domain-containing protein.
  
     0.491
A0A0D2PU57
MYND-type domain-containing protein.
  
     0.490
A0A0D2UR97
Uncharacterized protein.
  
     0.488
A0A0D2U4D5
MYND-type domain-containing protein.
  
     0.487
A0A0D2V398
Uncharacterized protein.
  
     0.484
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.