STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2TLJ2tRNA_lig_CPD domain-containing protein. (1127 aa)    
Predicted Functional Partners:
A0A0D2UDH4
Uncharacterized protein.
      
 0.511
A0A0D2W3F2
Uncharacterized protein.
  
     0.482
A0A0D2S2S6
Uncharacterized protein.
  
     0.478
A0A0D2RPH8
Uncharacterized protein.
  
     0.474
A0A0D2QD24
Uncharacterized protein.
  
     0.463
A0A0D2STD2
Uncharacterized protein.
  
     0.445
A0A0D2M398
Uncharacterized protein.
      
 0.442
A0A0D2SWA3
Uncharacterized protein.
      
 0.442
A0A0D2R1U7
Uncharacterized protein.
  
     0.438
A0A0D2PDC2
Uncharacterized protein.
  
     0.428
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.