STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2U2M5F-box domain-containing protein. (388 aa)    
Predicted Functional Partners:
A0A0D2RE70
Uncharacterized protein.
  
  0.498
A0A0D2S7A3
Uncharacterized protein.
  
     0.487
A0A0D2QT56
Uncharacterized protein.
  
  0.485
A0A0D2TIL5
Uncharacterized protein.
  
     0.473
A0A0D2NM47
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 
 0.464
A0A0D2T629
Uncharacterized protein.
  
     0.462
A0A0D2NDQ2
FBD domain-containing protein.
  
  
  0.459
A0A0D2TMS8
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
 
 
 0.457
A0A0D2UIG0
NAC domain-containing protein.
  
 
  0.456
A0A0D2SFQ1
Uncharacterized protein.
  
 
  0.455
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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