Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2U2P4Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (409 aa)    
Predicted Functional Partners:
A0A0D2LT12
Uncharacterized protein.
   
 0.871
A0A0D2UAM7
Uncharacterized protein.
   
 0.871
A0A0D2RKP8
Uncharacterized protein.
    
 0.790
A0A0D2SE57
Uncharacterized protein.
    
 0.790
A0A0D2LVY9
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.787
A0A0D2PEP2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.785
A0A0D2RNA1
Uncharacterized protein.
    
 0.729
A0A0D2MU74
Serine/threonine-protein phosphatase.
    
 0.719
A0A0D2SJE8
Serine/threonine-protein phosphatase.
    
 0.719
A0A0D2UIF0
Serine/threonine-protein phosphatase.
    
 0.719
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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