STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2UEJ3Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
A0A0D2Q829
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.976
A0A0D2QDK7
Uncharacterized protein.
  
 0.958
A0A0D2RDF3
Uncharacterized protein.
  
 0.958
A0A0D2PME5
Uncharacterized protein.
   
 0.950
A0A0D2PY75
Uncharacterized protein.
   
 0.950
A0A0D2T318
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.950
A0A0D2VBN3
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.950
A0A0D2S3G1
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.945
A0A0D2SPZ3
eIF2B_5 domain-containing protein.
   
 0.943
A0A0D2SR94
Uncharacterized protein.
   
 0.940
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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