STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2UES0Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (217 aa)    
Predicted Functional Partners:
A0A0D2NAI7
Peroxisomal membrane protein PEX16.
     
 0.606
A0A0D2N4L4
RING-type domain-containing protein.
     
 0.597
A0A0D2SKR5
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.562
A0A0D2QM74
Uncharacterized protein.
    
 0.533
A0A0D2RL19
Uncharacterized protein.
    
 0.533
A0A0D2S2X3
Uncharacterized protein.
    
 0.533
A0A0D2SJ56
Uncharacterized protein.
     
 0.527
A0A0D2U2H0
TPR_REGION domain-containing protein.
     
 0.527
A0A0D2PBG8
Uncharacterized protein; Belongs to the TPP enzyme family.
     
 0.468
A0A0D2LUX9
Uncharacterized protein.
   
 
 0.461
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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