STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2UZY1Pectinesterase; In the C-terminal section; belongs to the pectinesterase family. (548 aa)    
Predicted Functional Partners:
A0A0D2V7M9
Uncharacterized protein.
    
 0.631
A0A0D2QV83
Uncharacterized protein.
    
 0.593
A0A0D2Q829
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.510
A0A0D2PBU6
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
      
 0.424
A0A0D2QDK7
Uncharacterized protein.
   
   0.422
A0A0D2RDF3
Uncharacterized protein.
   
   0.422
A0A0D2PJ54
WD_REPEATS_REGION domain-containing protein.
    
  0.418
A0A0D2M9G9
TPR_MLP1_2 domain-containing protein.
    
 0.413
A0A0D2QX50
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.411
A0A0D2UIJ5
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.411
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.