STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2VAU1WD_REPEATS_REGION domain-containing protein. (341 aa)    
Predicted Functional Partners:
A0A0D2PKM1
HORMA domain-containing protein.
   
 0.972
A0A0D2R8Z5
HORMA domain-containing protein.
   
 0.972
A0A0D2RFQ0
WD_REPEATS_REGION domain-containing protein.
    
 0.966
A0A0D2V3H0
BUB1 N-terminal domain-containing protein.
   
 0.953
A0A0D2TXD5
BUB1 N-terminal domain-containing protein.
   
 0.952
A0A0D2VC16
Uncharacterized protein.
   
 0.952
A0A0D2SV20
BED-type domain-containing protein.
   
 
 0.940
A0A0D2SAN6
ANAPC5 domain-containing protein.
    
 0.929
A0A0D2NIL0
TPR_REGION domain-containing protein.
    
 0.920
A0A0D2UGG3
Uncharacterized protein.
    
 0.906
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.