STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2VEP0Protein kinase domain-containing protein. (603 aa)    
Predicted Functional Partners:
A0A0D2MD34
Zf-primase domain-containing protein.
   
  
 0.687
A0A0D2R5C7
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.654
A0A0D2SCD0
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
    0.607
A0A0D2QJM1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.601
A0A0D2UGC8
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.601
A0A0D2VC16
Uncharacterized protein.
   
 
 0.589
A0A0D2TXD5
BUB1 N-terminal domain-containing protein.
   
 
 0.546
A0A0D2V3H0
BUB1 N-terminal domain-containing protein.
   
 
 0.546
A0A0D2QDM3
Shugoshin_C domain-containing protein.
      
 0.504
A0A0D2QDQ6
HTH CENPB-type domain-containing protein.
   
  
 0.463
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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