Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2VGV2Protein kinase domain-containing protein. (388 aa)    
Predicted Functional Partners:
A0A0D2QXN7
Uncharacterized protein.
    
 
 0.786
A0A0D2T7Z1
J domain-containing protein.
    
 
 0.730
A0A0D2TZR2
J domain-containing protein.
    
 
 0.730
A0A0D2P6N5
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 
 0.624
A0A0D2QWI5
Uncharacterized protein.
   
 
 0.593
A0A0D2T664
Uncharacterized protein.
   
 
 0.593
A0A0D2TL23
Uncharacterized protein.
   
 
 0.593
A0A0D2TTN0
Uncharacterized protein.
   
 
 0.593
A0A0D2UPV1
Uncharacterized protein.
   
 
 0.593
A0A0D2M6X3
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
    
 
 0.554
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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