Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
B456_N023600Uncharacterized protein. (168 aa)    
Predicted Functional Partners:
A0A0D2Q5K9
Uncharacterized protein.
    
 0.714
A0A0D2R0F2
Uncharacterized protein.
    
 0.714
A0A0D2URD4
Uncharacterized protein.
    
 0.714
A0A0D2V9K8
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.623
B456_N008000
Uncharacterized protein.
    
 
 0.521
A0A0D2T6K0
DOD-type homing endonuclease domain-containing protein.
    
 
 0.520
A0A0D2LT12
Uncharacterized protein.
    
  0.511
A0A0D2UAM7
Uncharacterized protein.
    
  0.511
A0A0D2QR53
Uncharacterized protein; Belongs to the ATPase B chain family.
  
     0.495
A0A0D2RL64
Uncharacterized protein; Belongs to the ATPase B chain family.
  
     0.490
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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