Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OMF44281.1 | OMF57368.1 | BK138_34730 | BK138_01755 | Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
OMF54650.1 | OMF57368.1 | BK138_15935 | BK138_01755 | Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.619 |
OMF54650.1 | cinA | BK138_15935 | BK138_07745 | Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | 0.939 |
OMF57368.1 | OMF44281.1 | BK138_01755 | BK138_34730 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.453 |
OMF57368.1 | OMF54650.1 | BK138_01755 | BK138_15935 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.619 |
OMF57368.1 | OMF57369.1 | BK138_01755 | BK138_01760 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
OMF57368.1 | cinA | BK138_01755 | BK138_07745 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | 0.582 |
OMF57369.1 | OMF57368.1 | BK138_01760 | BK138_01755 | Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
cinA | OMF54650.1 | BK138_07745 | BK138_15935 | Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.939 |
cinA | OMF57368.1 | BK138_07745 | BK138_01755 | Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.582 |