STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VITISV_037190ClpS domain-containing protein. (157 aa)    
Predicted Functional Partners:
F6HAK4_VITVI
Uncharacterized protein.
  
 
 0.777
VITISV_012383
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 0.718
F6GT40_VITVI
UVR domain-containing protein; Belongs to the ClpA/ClpB family.
  
 
 0.645
F6H436_VITVI
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 0.645
F6H3V3_VITVI
Uncharacterized protein.
  
 
 0.644
D7SUY2_VITVI
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 0.643
D7T4P0_VITVI
Uncharacterized protein.
  
 
 0.643
D7UAQ3_VITVI
Uncharacterized protein.
  
 
 0.643
E0CPK6_VITVI
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
 
 0.643
HSP101
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 0.643
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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