STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VITISV_026640UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)    
Predicted Functional Partners:
F6HQV0_VITVI
HECT domain-containing protein.
   
 0.873
F6GWK5_VITVI
HECT domain-containing protein.
   
 0.870
F6I105_VITVI
HECT domain-containing protein.
   
 0.870
F6I1J3_VITVI
Uncharacterized protein.
   
 0.870
D7TX82_VITVI
Uncharacterized protein.
    
 0.828
D7TFI5_VITVI
Ubiquitin thioesterase.
    
 0.820
D6CH21_VITVI
RING-type domain-containing protein.
    
 0.744
F6I4I3_VITVI
RING-type domain-containing protein.
    
 0.744
E0CU83_VITVI
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.738
D7SY23_VITVI
Uncharacterized protein.
 
  
  0.720
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.