STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VITISV_003479UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (177 aa)    
Predicted Functional Partners:
F6H2M3_VITVI
TPR_REGION domain-containing protein.
   
 0.953
D7TN60_VITVI
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.945
D6CH21_VITVI
RING-type domain-containing protein.
   
 0.928
F6I4I3_VITVI
RING-type domain-containing protein.
   
 0.928
D7SPC3_VITVI
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 0.922
E0CVY8_VITVI
WD_REPEATS_REGION domain-containing protein.
    
 0.910
F6H7T8_VITVI
ANAPC4 domain-containing protein.
    
 0.910
VITISV_032578
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.902
D7TBH7_VITVI
Uncharacterized protein.
    
 0.899
F6HPK6_VITVI
RNase H domain-containing protein.
    
 0.899
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.