STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7SK07_VITVIUncharacterized protein. (461 aa)    
Predicted Functional Partners:
F6HJ87_VITVI
Uncharacterized protein.
      
 0.614
D7TE97_VITVI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.612
D7SKV9_VITVI
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
   
  
 0.611
F6HJ86_VITVI
Uncharacterized protein.
      
 0.587
F6HUN7_VITVI
Uncharacterized protein.
      
 0.580
F6I4L7_VITVI
Uncharacterized protein.
      
 0.541
AP2
Uncharacterized protein.
      
 0.441
F6GTB4_VITVI
Uncharacterized protein.
      
 0.422
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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