STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7SKT6_VITVILOB domain-containing protein. (202 aa)    
Predicted Functional Partners:
F6HRZ3_VITVI
Uncharacterized protein.
   
  
 0.619
F6GTM9_VITVI
Uncharacterized protein.
      
 0.616
F6H8X4_VITVI
Uncharacterized protein.
      
 0.616
F6I7Q3_VITVI
Uncharacterized protein; Belongs to the multicopper oxidase family.
   
  
 0.616
D7SHE0_VITVI
Pectate lyase.
      
 0.613
VITISV_006164
WHy domain-containing protein.
      
 0.612
D7U578_VITVI
Aa_trans domain-containing protein.
      
 0.611
F6GV05_VITVI
Expansin; Causes loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. Belongs to the expansin family. Expansin A subfamily.
      
 0.611
D7TG86_VITVI
Uncharacterized protein; Belongs to the expansin family.
      
 0.474
F6HGL9_VITVI
AP2/ERF domain-containing protein.
      
 0.474
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.