STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7SMI0_VITVIUncharacterized protein. (475 aa)    
Predicted Functional Partners:
VITISV_012698
Uncharacterized protein.
    
 0.930
F6H9J4_VITVI
Uncharacterized protein.
    
 0.930
F6GVB5_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 0.914
D7SL21_VITVI
B30.2/SPRY domain-containing protein.
    
 0.907
F6GZ78_VITVI
Uncharacterized protein.
   
 0.905
D7U343_VITVI
Uncharacterized protein.
   
 0.891
F6HLV5_VITVI
Uncharacterized protein.
   
 0.890
F6HBE5_VITVI
SMC_N domain-containing protein.
   
 
 0.855
D7TV27_VITVI
Tim44 domain-containing protein.
   
 
 0.837
F6GSM8_VITVI
PWWP domain-containing protein.
   
 0.817
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.