STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7SNQ8_VITVIUncharacterized protein. (524 aa)    
Predicted Functional Partners:
D7UAQ6_VITVI
Uncharacterized protein.
   
 0.968
F6HQ82_VITVI
Helicase ATP-binding domain-containing protein.
   
 0.967
D7U9R4_VITVI
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.966
E0CR79_VITVI
Uncharacterized protein.
    
 0.966
GTF2H2
General transcription factor IIH subunit.
    
 0.966
F6HV16_VITVI
Uncharacterized protein.
   
 0.949
D7TRJ8_VITVI
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.948
D7SLN5_VITVI
Uncharacterized protein.
   
 0.945
D7TWE3_VITVI
Uncharacterized protein.
    
 0.941
VITISV_017448
RPOL4c domain-containing protein.
    
 0.938
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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