STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7SVT3_VITVIUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (162 aa)    
Predicted Functional Partners:
VITISV_013543
Small ubiquitin-related modifier.
   
 0.985
D7SNT2_VITVI
Ubiquitin-like domain-containing protein.
   
 0.985
D7TED8_VITVI
Small ubiquitin-related modifier.
   
 0.985
D7UDJ9_VITVI
Small ubiquitin-related modifier.
   
 0.985
D7SGZ8_VITVI
ThiF domain-containing protein.
  
 0.980
D7U4M8_VITVI
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.974
F6H212_VITVI
SP-RING-type domain-containing protein.
   
 0.941
VITISV_031803
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.930
F6GUV3_VITVI
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.930
F6H2F2_VITVI
WPP domain-containing protein.
   
 0.918
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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