STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7T232_VITVIPHB domain-containing protein. (289 aa)    
Predicted Functional Partners:
F6I5L8_VITVI
Prohibitin.
   
 
 0.570
F6I7B8_VITVI
AAA_lid_3 domain-containing protein.
   
 0.497
F6H3N2_VITVI
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.496
F6H6F7_VITVI
AAA domain-containing protein.
   
 0.496
D7SV13_VITVI
Uncharacterized protein.
    
 0.437
D7T4Y9_VITVI
Uncharacterized protein.
    
 0.437
D7U851_VITVI
PHB domain-containing protein.
   
 
 0.427
F6H9U4_VITVI
Prohibitin.
   
 
 0.427
F6HP87_VITVI
Prohibitin.
   
 
 0.427
F6H3V9_VITVI
Flotillin-like.
   
 
 0.414
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.