STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7T649_VITVIBCNT-C domain-containing protein. (267 aa)    
Predicted Functional Partners:
D7SKY0_VITVI
RuvB-like helicase; Belongs to the RuvB family.
   
 
 0.784
F6GYA2_VITVI
TIP49 domain-containing protein.
   
 
 0.784
F6HEH9_VITVI
YL1_C domain-containing protein.
   
 
 0.783
D7TI06_VITVI
HIT-type domain-containing protein.
    
 
 0.762
D7U2M0_VITVI
Uncharacterized protein.
   
 
 0.756
D7U2M3_VITVI
SANT domain-containing protein.
   
 
 0.756
F6HLJ9_VITVI
Uncharacterized protein.
    
 
 0.666
F6HZ67_VITVI
Uncharacterized protein.
    
 
 0.666
F6H8A7_VITVI
RuvB-like helicase.
   
 
 0.640
F6H8A6_VITVI
RuvB-like helicase.
    
 
 0.639
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.