STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7TGB2_VITVIUncharacterized protein. (354 aa)    
Predicted Functional Partners:
D7TTH5_VITVI
Helicase ATP-binding domain-containing protein.
   
 0.932
F6HBF4_VITVI
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 0.883
F6HBF5_VITVI
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 0.883
D7U4F5_VITVI
RRM domain-containing protein.
    
 0.859
D7TGS2_VITVI
Smg4_UPF3 domain-containing protein.
   
 0.787
F6GYB4_VITVI
Smg4_UPF3 domain-containing protein.
   
 0.787
F6GYB6_VITVI
Smg4_UPF3 domain-containing protein.
   
 0.787
ABH1
MIF4G domain-containing protein.
     
 0.785
E0CTI1_VITVI
Nuclear cap-binding protein subunit 2.
   
 0.717
F6H5G6_VITVI
Uncharacterized protein.
   
 0.717
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.