Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D7SWH1_VITVI | D7T100_VITVI | D7SWH1 | D7T100 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.958 |
D7SWH1_VITVI | D7TKE4_VITVI | D7SWH1 | D7TKE4 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.649 |
D7SWH1_VITVI | E0CPX4_VITVI | D7SWH1 | E0CPX4 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.974 |
D7SWH1_VITVI | F6GUN3_VITVI | D7SWH1 | F6GUN3 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.808 |
D7SWH1_VITVI | F6HFE7_VITVI | D7SWH1 | F6HFE7 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.973 |
D7SWH1_VITVI | F6HTQ6_VITVI | D7SWH1 | F6HTQ6 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.991 |
D7SWH1_VITVI | F6HY64_VITVI | D7SWH1 | F6HY64 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.989 |
D7SWH1_VITVI | F6HZ57_VITVI | D7SWH1 | F6HZ57 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.700 |
D7SWH1_VITVI | MED17 | D7SWH1 | A5BHH4 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.762 |
D7SWH1_VITVI | MED20 | D7SWH1 | F6HGP1 | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.688 |
D7T100_VITVI | D7SWH1_VITVI | D7T100 | D7SWH1 | Uncharacterized protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. | 0.958 |
D7T100_VITVI | D7TKE4_VITVI | D7T100 | D7TKE4 | Uncharacterized protein. | Uncharacterized protein. | 0.611 |
D7T100_VITVI | E0CPX4_VITVI | D7T100 | E0CPX4 | Uncharacterized protein. | Uncharacterized protein. | 0.998 |
D7T100_VITVI | F6GUN3_VITVI | D7T100 | F6GUN3 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.540 |
D7T100_VITVI | F6HFE7_VITVI | D7T100 | F6HFE7 | Uncharacterized protein. | Uncharacterized protein. | 0.981 |
D7T100_VITVI | F6HTQ6_VITVI | D7T100 | F6HTQ6 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.993 |
D7T100_VITVI | F6HY64_VITVI | D7T100 | F6HY64 | Uncharacterized protein. | Uncharacterized protein. | 0.993 |
D7T100_VITVI | F6HZ57_VITVI | D7T100 | F6HZ57 | Uncharacterized protein. | Uncharacterized protein. | 0.701 |
D7T100_VITVI | MED17 | D7T100 | A5BHH4 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.695 |
D7T100_VITVI | MED20 | D7T100 | F6HGP1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.556 |
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