D7TQ89_VITVI protein (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

D7TQ89_VITVI

Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. (470 aa)

Predicted Functional Partners:

E0CRW7_VITVI

0.999

F6H2W8_VITVI

0.999

F6HQF0_VITVI

0.999

D7SWN2_VITVI

0.996

F6HD90_VITVI

0.996

F6HXR4_VITVI

0.996

E0CQF4_VITVI

0.992

F6HT97_VITVI

0.988

D7U7W7_VITVI

0.976

F6H0T0_VITVI

0.972

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7SWN2_VITVI	D7TQ89_VITVI	D7SWN2	D7TQ89	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	0.996
D7SWN2_VITVI	D7U7W7_VITVI	D7SWN2	D7U7W7	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the arginase family.	0.905
D7SWN2_VITVI	E0CQF4_VITVI	D7SWN2	E0CQF4	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.900
D7SWN2_VITVI	E0CRW7_VITVI	D7SWN2	E0CRW7	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.957
D7SWN2_VITVI	F6H0T0_VITVI	D7SWN2	F6H0T0	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein.	0.950
D7SWN2_VITVI	F6H2W8_VITVI	D7SWN2	F6H2W8	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	AA_kinase domain-containing protein.	0.922
D7SWN2_VITVI	F6HD90_VITVI	D7SWN2	F6HD90	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	AA_kinase domain-containing protein.	0.749
D7SWN2_VITVI	F6HQF0_VITVI	D7SWN2	F6HQF0	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Semialdhyde_dh domain-containing protein.	0.992
D7SWN2_VITVI	F6HT97_VITVI	D7SWN2	F6HT97	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	M20_dimer domain-containing protein.	0.983
D7SWN2_VITVI	F6HXR4_VITVI	D7SWN2	F6HXR4	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.901
D7TQ89_VITVI	D7SWN2_VITVI	D7TQ89	D7SWN2	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.996
D7TQ89_VITVI	D7U7W7_VITVI	D7TQ89	D7U7W7	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Uncharacterized protein; Belongs to the arginase family.	0.976
D7TQ89_VITVI	E0CQF4_VITVI	D7TQ89	E0CQF4	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.992
D7TQ89_VITVI	E0CRW7_VITVI	D7TQ89	E0CRW7	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Uncharacterized protein.	0.999
D7TQ89_VITVI	F6H0T0_VITVI	D7TQ89	F6H0T0	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Uncharacterized protein.	0.972
D7TQ89_VITVI	F6H2W8_VITVI	D7TQ89	F6H2W8	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	AA_kinase domain-containing protein.	0.999
D7TQ89_VITVI	F6HD90_VITVI	D7TQ89	F6HD90	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	AA_kinase domain-containing protein.	0.996
D7TQ89_VITVI	F6HQF0_VITVI	D7TQ89	F6HQF0	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Semialdhyde_dh domain-containing protein.	0.999
D7TQ89_VITVI	F6HT97_VITVI	D7TQ89	F6HT97	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	M20_dimer domain-containing protein.	0.988
D7TQ89_VITVI	F6HXR4_VITVI	D7TQ89	F6HXR4	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.	0.996

page 1 of 6

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2024

Credits

Access

Info

About