D7TQA3_VITVI protein (Vitis vinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

D7TQA3_VITVI

Uncharacterized protein. (495 aa)

Predicted Functional Partners:

F6HI40_VITVI

0.800

F6HS20_VITVI

0.658

D7TQR4_VITVI

0.627

E0CT62_VITVI

0.619

D7T6E8_VITVI

0.618

D7TYY3_VITVI

0.618

D7T839_VITVI

0.616

D7TRK0_VITVI

0.616

F6I3A5_VITVI

0.616

F6I5V0_VITVI

0.615

Your Current Organism:

Vitis vinifera

NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D7T6E8_VITVI	D7TQA3_VITVI	D7T6E8	D7TQA3	Uncharacterized protein.	Uncharacterized protein.	0.618
D7T6E8_VITVI	D7TQR4_VITVI	D7T6E8	D7TQR4	Uncharacterized protein.	Uncharacterized protein.	0.611
D7T6E8_VITVI	D7TYY3_VITVI	D7T6E8	D7TYY3	Uncharacterized protein.	DUF3700 domain-containing protein.	0.627
D7T839_VITVI	D7TQA3_VITVI	D7T839	D7TQA3	Phosphatidate cytidylyltransferase; May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Belongs to the CDS family.	Uncharacterized protein.	0.616
D7T839_VITVI	D7TRK0_VITVI	D7T839	D7TRK0	Phosphatidate cytidylyltransferase; May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Belongs to the CDS family.	Phosphatidate cytidylyltransferase; Belongs to the CDS family.	0.900
D7T839_VITVI	E0CT62_VITVI	D7T839	E0CT62	Phosphatidate cytidylyltransferase; May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Belongs to the CDS family.	WD_REPEATS_REGION domain-containing protein.	0.635
D7T839_VITVI	F6I3A5_VITVI	D7T839	F6I3A5	Phosphatidate cytidylyltransferase; May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Belongs to the CDS family.	Uncharacterized protein.	0.900
D7T839_VITVI	F6I5V0_VITVI	D7T839	F6I5V0	Phosphatidate cytidylyltransferase; May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Belongs to the CDS family.	Myotubularin phosphatase domain-containing protein.	0.636
D7TQA3_VITVI	D7T6E8_VITVI	D7TQA3	D7T6E8	Uncharacterized protein.	Uncharacterized protein.	0.618
D7TQA3_VITVI	D7T839_VITVI	D7TQA3	D7T839	Uncharacterized protein.	Phosphatidate cytidylyltransferase; May be involved in the synthesis of minor phospholipids and in modulation of IP3-mediated signal transduction. Belongs to the CDS family.	0.616
D7TQA3_VITVI	D7TQR4_VITVI	D7TQA3	D7TQR4	Uncharacterized protein.	Uncharacterized protein.	0.627
D7TQA3_VITVI	D7TRK0_VITVI	D7TQA3	D7TRK0	Uncharacterized protein.	Phosphatidate cytidylyltransferase; Belongs to the CDS family.	0.616
D7TQA3_VITVI	D7TYY3_VITVI	D7TQA3	D7TYY3	Uncharacterized protein.	DUF3700 domain-containing protein.	0.618
D7TQA3_VITVI	E0CT62_VITVI	D7TQA3	E0CT62	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.619
D7TQA3_VITVI	F6HI40_VITVI	D7TQA3	F6HI40	Uncharacterized protein.	Uncharacterized protein.	0.800
D7TQA3_VITVI	F6HS20_VITVI	D7TQA3	F6HS20	Uncharacterized protein.	Uncharacterized protein.	0.658
D7TQA3_VITVI	F6I3A5_VITVI	D7TQA3	F6I3A5	Uncharacterized protein.	Uncharacterized protein.	0.616
D7TQA3_VITVI	F6I5V0_VITVI	D7TQA3	F6I5V0	Uncharacterized protein.	Myotubularin phosphatase domain-containing protein.	0.615
D7TQR4_VITVI	D7T6E8_VITVI	D7TQR4	D7T6E8	Uncharacterized protein.	Uncharacterized protein.	0.611
D7TQR4_VITVI	D7TQA3_VITVI	D7TQR4	D7TQA3	Uncharacterized protein.	Uncharacterized protein.	0.627