STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7TS48_VITVINB-ARC domain-containing protein; Belongs to the disease resistance NB-LRR family. (665 aa)    
Predicted Functional Partners:
F6HZT8_VITVI
Uncharacterized protein.
   
    0.658
F6HCK1_VITVI
Protein kinase domain-containing protein.
  
    0.452
D7SQF1_VITVI
Uncharacterized protein.
  
     0.425
F6HXH0_VITVI
Uncharacterized protein.
  
     0.424
D7SRY0_VITVI
Uncharacterized protein.
   
    0.422
D7T3T3_VITVI
Uncharacterized protein.
   
    0.422
D7TM47_VITVI
Pectate lyase.
   
    0.422
F6HV94_VITVI
Uncharacterized protein.
   
    0.422
F6I2Q9_VITVI
Protein kinase domain-containing protein.
   
    0.422
MYBPA1
Uncharacterized protein.
   
    0.422
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.