STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7TTK9_VITVIRAI1 domain-containing protein. (403 aa)    
Predicted Functional Partners:
D7SV11_VITVI
Uncharacterized protein.
   
   0.845
D7TL29_VITVI
XRN_M domain-containing protein.
   
 
 0.675
F6HEH8_VITVI
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
   
 
 0.675
F6H077_VITVI
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
   
 
 0.674
F6HHB8_VITVI
Uncharacterized protein.
   
 
 0.674
F6HTU6_VITVI
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
   
 
 0.674
F6HTU7_VITVI
XRN_N domain-containing protein.
   
 
 0.674
F6H4N7_VITVI
CID domain-containing protein.
   
 
 0.575
D7TFX9_VITVI
Uncharacterized protein.
   
 
 0.574
D7SH31_VITVI
CID domain-containing protein.
    
 
 0.573
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (24%) [HD]