STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7TUM1_VITVITPR_REGION domain-containing protein. (300 aa)    
Predicted Functional Partners:
VITISV_022312
ER membrane protein complex subunit 3.
   
 0.987
VITISV_010104
Uncharacterized protein.
   
 0.986
D7SUC3_VITVI
EMC1_C domain-containing protein.
   
 0.983
D7TQQ0_VITVI
Uncharacterized protein.
    
 0.975
D7UAL1_VITVI
MPN domain-containing protein.
   
 0.975
D7SV30_VITVI
DUF2012 domain-containing protein.
   
 0.971
D7SPM6_VITVI
Uncharacterized protein.
    
 
 0.944
F6HYK0_VITVI
SRP54 domain-containing protein.
      
 0.576
F6HK49_VITVI
Uncharacterized protein.
   
 
 0.548
D7SY37_VITVI
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.489
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.