STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7TVD9_VITVIUncharacterized protein; Belongs to the WD repeat SEC13 family. (325 aa)    
Predicted Functional Partners:
D7THT1_VITVI
Nuclear pore protein.
   
 0.990
F6HXR0_VITVI
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.990
D7SU98_VITVI
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.989
F6HAE0_VITVI
UBA domain-containing protein.
    
 0.989
F6HXU3_VITVI
Uncharacterized protein.
   
 0.989
D7TC07_VITVI
Uncharacterized protein.
   
 0.985
F6H2J0_VITVI
C2H2-type domain-containing protein.
    
 0.985
VITISV_040760
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
0.984
D7UAK0_VITVI
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
0.984
F6HG89_VITVI
Nup54 domain-containing protein.
   
 0.984
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (20%) [HD]