STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7U0U7_VITVIWD_REPEATS_REGION domain-containing protein. (346 aa)    
Predicted Functional Partners:
D7TBW1_VITVI
WD_REPEATS_REGION domain-containing protein.
  
  
 
0.900
D7SHE6_VITVI
WD_REPEATS_REGION domain-containing protein.
  
 
 
 0.523
F6HPJ7_VITVI
WD_REPEATS_REGION domain-containing protein.
  
 
 
 0.521
D7SVC1_VITVI
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
  
    0.519
F6GSV3_VITVI
WD_REPEATS_REGION domain-containing protein.
  
 
 
 0.519
D7T241_VITVI
Uncharacterized protein.
   
  
 0.517
F6GVP5_VITVI
WD_REPEATS_REGION domain-containing protein.
  
 
 
 0.516
F6HYD2_VITVI
WD_REPEATS_REGION domain-containing protein.
  
 
 
 0.499
F6HR38_VITVI
Uncharacterized protein.
    
   0.493
F6HD93_VITVI
Uncharacterized protein.
  
     0.477
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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