STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7U2L5_VITVINifU domain-containing protein. (213 aa)    
Predicted Functional Partners:
D7UAV2_VITVI
4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
      
 0.872
F6GX20_VITVI
4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
      
 0.872
L-CDes
1-aminocyclopropane-1-carboxylate deaminase.
  
 0.770
F6GZ59_VITVI
Aminotran_5 domain-containing protein.
  
 0.770
F6GZ61_VITVI
Aminotran_5 domain-containing protein.
  
 0.770
D7T1C8_VITVI
Aminotran_5 domain-containing protein.
  
 0.746
F6HS67_VITVI
Uncharacterized protein.
  
 
 0.739
F6HZG0_VITVI
Aminotran_5 domain-containing protein.
  
 0.711
F6I4H9_VITVI
Aminotran_5 domain-containing protein.
  
 0.711
F6HKL2_VITVI
Uncharacterized protein.
  
 
 0.679
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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