STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7U8E3_VITVIUncharacterized protein. (109 aa)    
Predicted Functional Partners:
E0CTI4_VITVI
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.595
D7TAI6_VITVI
UBX domain-containing protein.
  
  
  0.574
D7T0N7_VITVI
RPN13_C domain-containing protein.
   
 0.570
D7SHA5_VITVI
PCI domain-containing protein.
    
 0.556
D7UAV6_VITVI
TPR_REGION domain-containing protein.
    
 0.550
F6HT17_VITVI
PCI domain-containing protein.
    
 0.543
D7STW0_VITVI
RING-type domain-containing protein.
     
 0.510
F6HCK0_VITVI
Uncharacterized protein.
  
 
 0.498
D7SR99_VITVI
PDZ domain-containing protein.
      
 0.489
D7SKV3_VITVI
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
 0.486
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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