STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D7U8S8_VITVIUncharacterized protein. (198 aa)    
Predicted Functional Partners:
D7TR31_VITVI
RRM domain-containing protein.
  
 
 0.650
F6HJC7_VITVI
RRM domain-containing protein.
  
 
 0.620
F6H8S2_VITVI
Uncharacterized protein.
  
 
 0.553
F6HUL8_VITVI
RRM domain-containing protein.
  
 
   0.538
D7U819_VITVI
Uncharacterized protein.
  
 
  0.536
D7TCR3_VITVI
RRM domain-containing protein.
  
     0.535
F6GV38_VITVI
RRM domain-containing protein.
  
     0.535
D7FBB4_VITVI
RRM domain-containing protein.
  
     0.534
F6HHF8_VITVI
Uncharacterized protein.
  
 
  0.534
F6HVP6_VITVI
RRM domain-containing protein.
  
     0.532
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.