STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0CQC6_VITVIMethyltransferase. (724 aa)    
Predicted Functional Partners:
F6H7M2_VITVI
SAM_MT_TRM5_TYW2 domain-containing protein.
   
 
 0.795
D7T4F6_VITVI
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
    
  0.706
D7SLY5_VITVI
Leucine carboxyl methyltransferase 1 homolog; Involved in brassinosteroid (BR) signaling.
   
  
 0.563
D7TFC0_VITVI
Uncharacterized protein.
   
  
 0.549
D7SP76_VITVI
WD_REPEATS_REGION domain-containing protein.
   
 
 0.544
D7THA3_VITVI
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.522
D7SHF0_VITVI
Protein-L-isoaspartate O-methyltransferase.
   
    0.499
F6H0C9_VITVI
Uncharacterized protein.
      
 0.495
D7TIN5_VITVI
WD_REPEATS_REGION domain-containing protein.
   
    0.483
D7TDY8_VITVI
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
  
 0.475
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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