STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0CR26_VITVIPeptidase_S24 domain-containing protein. (173 aa)    
Predicted Functional Partners:
F6HH17_VITVI
Peptidase_S26 domain-containing protein.
  
  
 
0.904
E0CPC9_VITVI
Peptidase_S26 domain-containing protein.
  
 
 
0.903
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.869
D7TAV5_VITVI
Uncharacterized protein.
   
 0.857
F6HAE0_VITVI
UBA domain-containing protein.
    
 0.856
D7T6S0_VITVI
Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family.
   
 0.733
F6HMQ3_VITVI
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
   
 0.733
F6HYY3_VITVI
Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family.
   
 0.733
D7SQI2_VITVI
DNA ligase.
    
 0.713
D7U9N4_VITVI
SAP domain-containing protein.
     
 0.664
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
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