STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0CRA1_VITVIUncharacterized protein. (111 aa)    
Predicted Functional Partners:
D7SL21_VITVI
B30.2/SPRY domain-containing protein.
    
 0.818
F6GVB5_VITVI
WD_REPEATS_REGION domain-containing protein.
    
 0.802
VITISV_002271
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.790
D7SU28_VITVI
Uncharacterized protein.
    
 
 0.607
F6H8R2_VITVI
ENTH domain-containing protein.
      
 0.606
F6GV17_VITVI
ENTH domain-containing protein.
      
 0.597
F6GSH4_VITVI
Uncharacterized protein.
      
 0.596
F6GVU9_VITVI
Uncharacterized protein.
   
  
 0.581
F6H839_VITVI
Uncharacterized protein.
   
  
 0.581
F6HA71_VITVI
Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.
   
  
 0.565
Your Current Organism:
Vitis vinifera
NCBI taxonomy Id: 29760
Other names: V. vinifera, Vitis vinifera L., Vitis vinifera subsp. vinifera, wine grape
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.